MICAS: Microsatellite Analysis Server 3.0

All Non-Coding Repeats of Xanthomonas axonopodis pv. citri str. 306 plasmid pXAC33

Total Repeats: 115

S.No.	Genome ID	Motif	Iterations	Length	Start	End	A%	T%	G%	C%	Protein ID
1	NC_003921	CCT	2	6	5	10	0 %	33.33 %	0 %	66.67 %	Non-Coding
2	NC_003921	CTG	2	6	32	37	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
3	NC_003921	AGG	2	6	57	62	33.33 %	0 %	66.67 %	0 %	Non-Coding
4	NC_003921	CCG	3	9	66	74	0 %	0 %	33.33 %	66.67 %	Non-Coding
5	NC_003921	GCA	2	6	97	102	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
6	NC_003921	CGG	2	6	120	125	0 %	0 %	66.67 %	33.33 %	Non-Coding
7	NC_003921	GTC	2	6	164	169	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
8	NC_003921	GCG	3	9	178	186	0 %	0 %	66.67 %	33.33 %	Non-Coding
9	NC_003921	ACTG	2	8	212	219	25 %	25 %	25 %	25 %	Non-Coding
10	NC_003921	G	6	6	322	327	0 %	0 %	100 %	0 %	Non-Coding
11	NC_003921	GCG	2	6	339	344	0 %	0 %	66.67 %	33.33 %	Non-Coding
12	NC_003921	GTG	2	6	347	352	0 %	33.33 %	66.67 %	0 %	Non-Coding
13	NC_003921	GCC	2	6	359	364	0 %	0 %	33.33 %	66.67 %	Non-Coding
14	NC_003921	GGC	2	6	373	378	0 %	0 %	66.67 %	33.33 %	Non-Coding
15	NC_003921	CGG	2	6	1359	1364	0 %	0 %	66.67 %	33.33 %	Non-Coding
16	NC_003921	GAG	2	6	2120	2125	33.33 %	0 %	66.67 %	0 %	Non-Coding
17	NC_003921	TCCG	2	8	3837	3844	0 %	25 %	25 %	50 %	Non-Coding
18	NC_003921	GCC	2	6	4313	4318	0 %	0 %	33.33 %	66.67 %	Non-Coding
19	NC_003921	TTTG	2	8	4373	4380	0 %	75 %	25 %	0 %	Non-Coding
20	NC_003921	GCC	3	9	4445	4453	0 %	0 %	33.33 %	66.67 %	Non-Coding
21	NC_003921	CCG	2	6	4473	4478	0 %	0 %	33.33 %	66.67 %	Non-Coding
22	NC_003921	TGG	2	6	4555	4560	0 %	33.33 %	66.67 %	0 %	Non-Coding
23	NC_003921	AAG	2	6	4583	4588	66.67 %	0 %	33.33 %	0 %	Non-Coding
24	NC_003921	TC	3	6	4600	4605	0 %	50 %	0 %	50 %	Non-Coding
25	NC_003921	ACC	2	6	4702	4707	33.33 %	0 %	0 %	66.67 %	Non-Coding
26	NC_003921	ATCA	2	8	4735	4742	50 %	25 %	0 %	25 %	Non-Coding
27	NC_003921	ATG	2	6	4744	4749	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
28	NC_003921	CTG	2	6	5212	5217	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
29	NC_003921	ACGG	2	8	5246	5253	25 %	0 %	50 %	25 %	Non-Coding
30	NC_003921	TCG	2	6	6116	6121	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
31	NC_003921	GCG	2	6	6523	6528	0 %	0 %	66.67 %	33.33 %	Non-Coding
32	NC_003921	GCT	2	6	6565	6570	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
33	NC_003921	CA	3	6	6872	6877	50 %	0 %	0 %	50 %	Non-Coding
34	NC_003921	CTG	2	6	6902	6907	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
35	NC_003921	GCT	2	6	8130	8135	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
36	NC_003921	GCAG	2	8	8169	8176	25 %	0 %	50 %	25 %	Non-Coding
37	NC_003921	GCC	2	6	8239	8244	0 %	0 %	33.33 %	66.67 %	Non-Coding
38	NC_003921	GCA	2	6	8959	8964	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
39	NC_003921	GC	3	6	9015	9020	0 %	0 %	50 %	50 %	Non-Coding
40	NC_003921	TCG	2	6	9089	9094	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
41	NC_003921	CCA	2	6	9171	9176	33.33 %	0 %	0 %	66.67 %	Non-Coding
42	NC_003921	CGAC	2	8	9198	9205	25 %	0 %	25 %	50 %	Non-Coding
43	NC_003921	CCA	2	6	9215	9220	33.33 %	0 %	0 %	66.67 %	Non-Coding
44	NC_003921	GCA	2	6	9333	9338	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
45	NC_003921	GCT	2	6	9345	9350	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
46	NC_003921	TA	5	10	10791	10800	50 %	50 %	0 %	0 %	Non-Coding
47	NC_003921	TA	5	10	10811	10820	50 %	50 %	0 %	0 %	Non-Coding
48	NC_003921	CGA	2	6	10854	10859	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
49	NC_003921	TTG	2	6	10900	10905	0 %	66.67 %	33.33 %	0 %	Non-Coding
50	NC_003921	GA	3	6	11260	11265	50 %	0 %	50 %	0 %	Non-Coding
51	NC_003921	CAG	2	6	11276	11281	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
52	NC_003921	CAGGG	2	10	11341	11350	20 %	0 %	60 %	20 %	Non-Coding
53	NC_003921	GC	3	6	11447	11452	0 %	0 %	50 %	50 %	Non-Coding
54	NC_003921	TGA	2	6	11481	11486	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
55	NC_003921	GC	3	6	12780	12785	0 %	0 %	50 %	50 %	Non-Coding
56	NC_003921	CAG	2	6	12789	12794	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
57	NC_003921	GCA	2	6	12861	12866	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
58	NC_003921	GGC	2	6	12880	12885	0 %	0 %	66.67 %	33.33 %	Non-Coding
59	NC_003921	A	6	6	12990	12995	100 %	0 %	0 %	0 %	Non-Coding
60	NC_003921	TTAC	2	8	13031	13038	25 %	50 %	0 %	25 %	Non-Coding
61	NC_003921	CGA	2	6	16567	16572	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
62	NC_003921	GGA	2	6	16615	16620	33.33 %	0 %	66.67 %	0 %	Non-Coding
63	NC_003921	T	6	6	16679	16684	0 %	100 %	0 %	0 %	Non-Coding
64	NC_003921	TCC	2	6	17960	17965	0 %	33.33 %	0 %	66.67 %	Non-Coding
65	NC_003921	GCA	2	6	17983	17988	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
66	NC_003921	TCG	2	6	18007	18012	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
67	NC_003921	AGC	3	9	18021	18029	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
68	NC_003921	GAT	2	6	18074	18079	33.33 %	33.33 %	33.33 %	0 %	Non-Coding
69	NC_003921	AAG	2	6	18134	18139	66.67 %	0 %	33.33 %	0 %	Non-Coding
70	NC_003921	CGC	2	6	18151	18156	0 %	0 %	33.33 %	66.67 %	Non-Coding
71	NC_003921	CGC	2	6	18162	18167	0 %	0 %	33.33 %	66.67 %	Non-Coding
72	NC_003921	TA	3	6	18838	18843	50 %	50 %	0 %	0 %	Non-Coding
73	NC_003921	CTG	2	6	18880	18885	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
74	NC_003921	TCG	2	6	19888	19893	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
75	NC_003921	CCG	2	6	19894	19899	0 %	0 %	33.33 %	66.67 %	Non-Coding
76	NC_003921	GTC	2	6	19945	19950	0 %	33.33 %	33.33 %	33.33 %	Non-Coding
77	NC_003921	GCC	2	6	19957	19962	0 %	0 %	33.33 %	66.67 %	Non-Coding
78	NC_003921	CAA	2	6	20069	20074	66.67 %	0 %	0 %	33.33 %	Non-Coding
79	NC_003921	AGA	2	6	20262	20267	66.67 %	0 %	33.33 %	0 %	Non-Coding
80	NC_003921	GC	3	6	22176	22181	0 %	0 %	50 %	50 %	Non-Coding
81	NC_003921	CTT	2	6	22184	22189	0 %	66.67 %	0 %	33.33 %	Non-Coding
82	NC_003921	CCA	2	6	22202	22207	33.33 %	0 %	0 %	66.67 %	Non-Coding
83	NC_003921	GAA	2	6	22225	22230	66.67 %	0 %	33.33 %	0 %	Non-Coding
84	NC_003921	GTT	2	6	22365	22370	0 %	66.67 %	33.33 %	0 %	Non-Coding
85	NC_003921	TTG	2	6	22378	22383	0 %	66.67 %	33.33 %	0 %	Non-Coding
86	NC_003921	CT	3	6	26048	26053	0 %	50 %	0 %	50 %	Non-Coding
87	NC_003921	T	8	8	26100	26107	0 %	100 %	0 %	0 %	Non-Coding
88	NC_003921	CAA	2	6	26177	26182	66.67 %	0 %	0 %	33.33 %	Non-Coding
89	NC_003921	ATT	2	6	26221	26226	33.33 %	66.67 %	0 %	0 %	Non-Coding
90	NC_003921	TTAC	2	8	27251	27258	25 %	50 %	0 %	25 %	Non-Coding
91	NC_003921	CGA	2	6	30697	30702	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
92	NC_003921	GGA	2	6	30745	30750	33.33 %	0 %	66.67 %	0 %	Non-Coding
93	NC_003921	T	6	6	30809	30814	0 %	100 %	0 %	0 %	Non-Coding
94	NC_003921	CTT	2	6	30898	30903	0 %	66.67 %	0 %	33.33 %	Non-Coding
95	NC_003921	GGCCG	2	10	30932	30941	0 %	0 %	60 %	40 %	Non-Coding
96	NC_003921	G	6	6	30973	30978	0 %	0 %	100 %	0 %	Non-Coding
97	NC_003921	TGAAGG	2	12	31054	31065	33.33 %	16.67 %	50 %	0 %	Non-Coding
98	NC_003921	G	8	8	31106	31113	0 %	0 %	100 %	0 %	Non-Coding
99	NC_003921	CCT	2	6	31176	31181	0 %	33.33 %	0 %	66.67 %	Non-Coding
100	NC_003921	CGG	2	6	31276	31281	0 %	0 %	66.67 %	33.33 %	Non-Coding
101	NC_003921	CCT	2	6	31338	31343	0 %	33.33 %	0 %	66.67 %	Non-Coding
102	NC_003921	GGT	2	6	31439	31444	0 %	33.33 %	66.67 %	0 %	Non-Coding
103	NC_003921	TGGAGG	2	12	31467	31478	16.67 %	16.67 %	66.67 %	0 %	Non-Coding
104	NC_003921	CGG	2	6	31530	31535	0 %	0 %	66.67 %	33.33 %	Non-Coding
105	NC_003921	GCG	2	6	31606	31611	0 %	0 %	66.67 %	33.33 %	Non-Coding
106	NC_003921	CTTT	2	8	32711	32718	0 %	75 %	0 %	25 %	Non-Coding
107	NC_003921	T	6	6	32716	32721	0 %	100 %	0 %	0 %	Non-Coding
108	NC_003921	ACG	2	6	32739	32744	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
109	NC_003921	A	6	6	32751	32756	100 %	0 %	0 %	0 %	Non-Coding
110	NC_003921	AAG	2	6	33546	33551	66.67 %	0 %	33.33 %	0 %	Non-Coding
111	NC_003921	TAT	2	6	33560	33565	33.33 %	66.67 %	0 %	0 %	Non-Coding
112	NC_003921	TCT	2	6	33566	33571	0 %	66.67 %	0 %	33.33 %	Non-Coding
113	NC_003921	CGG	2	6	33610	33615	0 %	0 %	66.67 %	33.33 %	Non-Coding
114	NC_003921	GCA	2	6	33620	33625	33.33 %	0 %	33.33 %	33.33 %	Non-Coding
115	NC_003921	TG	3	6	33630	33635	0 %	50 %	50 %	0 %	Non-Coding

©2012. Centre for DNA Fingerprinting & Diagnostics (CDFD), Hyderabad.